{"Id":"d20f5d57-99c4-4c46-acdb-c7f53a7dd2ed","CanonicalId":"","Url":"https://github.com/theislab/pseudodynamics","Name":"Pseudodynamics modeling framework (MATLAB implementation)","Description":"A set of scripts to implement pseudodynamics, a mathematical framework that models population distribution shifts across trajectories to quantify selection pressure, population expansion, and developmental potentials. It was applied to time-resolved single-cell RNA-sequencing of T-cell and pancreatic beta cell maturation to characterize proliferation and apoptosis rates and identify key developmental checkpoints, data inaccessible to existing approaches.","ResourceType":"CodePipelineTechnology","ParentResourceType":"Technology","DefiningManuscriptId":"PMID30936567","Publications":[],"Contributors":[{"Role":{"CanonicalId":"hirn-cv-ResourceRole-producer","Url":"resources.hirnetwork.org/api/v1/CV/","Name":"Producer","OntologyId":"HIRN"},"HirnUserId":"Heiko_Lickert@hirnetwork.org","FirstName":"Heiko","LastName":"Lickert","EmailAddress":"heiko.lickert@zimbra.helmholtz-muenchen.de","Organization":"Institute of Diabetes and  Regeneration Research","Consortia":[]},{"Role":{"CanonicalId":"hirn-cv-ResourceRole-producer","Url":"resources.hirnetwork.org/api/v1/CV/","Name":"Producer","OntologyId":"HIRN"},"HirnUserId":"Rene_Maehr@hirnetwork.org","FirstName":"Rene","LastName":"Maehr","EmailAddress":"rene.maehr@umassmed.edu","Organization":"University of Massachusetts Medical School","Consortia":[]}],"Vendor":{"id":null,"Name":null,"Url":null},"VendorResourceName":null,"VendorResourceUrl":null,"VendorCatNumber":null,"VendorLotNumber":null,"DateCreated":"2019-04-26T01:22:19.5718812+00:00","DateModified":"2022-07-01T03:35:15.7174014+00:00","VersionId":"1","ModelVersion":"4.0","TechnologyData":{"Dependencies":[],"AssayTechnologyData":{"BioSampleType":[],"CellsTestedWith":[],"AssayTarget":{"CanonicalId":null,"Url":null,"Name":null,"OntologyId":null},"AssayCategory":{"CanonicalId":null,"Url":null,"Name":null,"OntologyId":null},"TechnologyType":{"CanonicalId":null,"Url":null,"Name":null,"OntologyId":null},"TechnologyPlatform":null,"CompatibleTools":[]},"DeviceEquipmentTechnologyData":{"CompatibleTools":[],"CellsTestedWith":[],"Placeholder":"Test"},"ServiceTechnologyData":{"CellsTestedWith":[],"Placeholder":"test"},"CodePipelineTechnologyData":{"Placeholder":"Test"}}}