Resource Type
Technology / CodePipelineTechnology
Resource Name

Matlab script used for data processing of amplicon bisulfite sequencing reads for selected methylation markers from circulating DNA
Canonical Identifier
Description
A script for filtering and identifying reads (from Illumina) for specific methylation markers.
Contributors
NameOrganizationConsortiumContact
Clive WasserfallUniversity of Florida Contact
Desmond SchatzUniversity of FloridaCBDS Contact
Carla GreenbaumBenaroya Research InstituteCBDS Contact
Markus GrompeOregon Health and Science UniversityCTAR Contact
Benjamin GlaserHadassah-Hebrew UniversityCTAR Contact
Ruth ShemerHebrew University of JerusalemCBDS Contact
Yuval DorHebrew University of JerusalemCBDS, OPP Contact
Defining Manuscript Identifier
PMID26976580
Related Resources
Canonical IdentifierNameResource Type
EP3643795A1Identification of tissue-specific cell death using methylation patterns of circulating DNAAssayTechnology
Methylome data for human pancreatic alpha cells (two replicates), pancreatic beta cells (three replicates), pancreatic duct cells, and pancreatic acinar cellsDataset


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